Who Guards the Guardians? The Challenges of Evaluating Identifiability of Learned Representations

Abstract

Identifiability in representation learning is commonly evaluated using standard metrics (e.g., MCC, DCI, R^2) on synthetic benchmarks with known ground-truth factors. These metrics are assumed to reflect recovery up to the equivalence class guaranteed by identifiability theory. We show that this assumption holds only under specific structural conditions: each metric implicitly encodes assumptions about both the data-generating process (DGP) and the encoder. When these assumptions are violated, metrics become misspecified and can produce systematic false positives and false negatives. Such failures occur both within classical identifiability regimes and in post-hoc settings where identifiability is most needed. We introduce a taxonomy separating DGP assumptions from encoder geometry, use it to characterise the validity domains of existing metrics, and release an evaluation suite for reproducible stress testing and comparison.

Wieland Brendel

Principal Investigator (PI)

Wieland Brendel received his Diploma in physics from the University of Regensburg (2010) and his Ph.D. in computational neuroscience from the École normale supérieure in Paris (2014). He joined the University of Tübingen as a postdoctoral researcher in the group of Matthias Bethge, became a Principal Investigator and Team Lead in the Tübingen AI Center (2018) and an Emmy Noether Group Leader for Robust Machine Learning (2020). In May 2022, Wieland joined the Max-Planck Institute for Intelligent Systems as an independent Group Leader and is now a Hector-endowed Fellow at the ELLIS Institute Tübingen (since September 2023). He received the 2023 German Pattern Recognition Award for his substantial contributions on robust, generalisable and interpretable machine vision. Aside of his research, Wieland co-founded a nationwide school competition (bw-ki.de) and a machine learning startup focused on visual quality control.

Patrik Reizinger

PhD candidate → MILA

I am a final-year Ph.D. student supervised by Wieland Brendel, Ferenc Huszár, Matthias Bethge, and Bernhard Schölkopf. I am part of the ELLIS and IMPRS-IS programs. I have also spent time at the Vector Institute and at the University of Cambridge.